NetworkBehaviour work around breaks Cloud builds

So I'm using a work around for NetworkBehaviours in DLLs, which involves copying the UnityEngine.Networking.DLL into the plugin folders in the project so it will see the NetworkBehaviours within an external DLL we have written. I disabled this DLL for standalone builds as this of course will cause a conflict and is only a work around so that the behaviours are visible in the editor.

This worked fine till I tried to use the cloud service to make a build for some reason it seems to be ignoring my flag that told it to NOT use the UnityEngine.Networking.DLL copy I've made and its throwing errors about it being loaded twice. Is there some kind of flag I can set to make it ignore this?

Error:

Code (CSharp):

1. 2445: [Unity] -----CompilerOutput:-stdout--exitcode: 1--compilationhadfailure: True--outfile: Temp/Assembly-CSharp-firstpass.dll
2. 2446: [Unity] Compilation failed: 1 error(s), 0 warnings
3. 2447: [Unity] error CS1704: An assembly with the same name `UnityEngine.Networking' has already been imported. Consider removing one of the references or sign the assembly
4. 2448: [Unity] /UNITY_PATH/Unity/Unity-5_5_3f1/Unity.app/Contents/UnityExtensions/Unity/Networking/UnityEngine.Networking.dll (Location of the symbol related to previous error)
5. 2449: [Unity] Assets/Plugins/LockStepNetworking/UnityEngine.Networking.dll (Location of the symbol related to previous error)
6. 2450: [Unity] - Finished compile Library/ScriptAssemblies/Assembly-CSharp-firstpass.dll
7. 2451: [Unity] error CS1704: An assembly with the same name `UnityEngine.Networking' has already been imported. Consider removing one of the references or sign the assembly
8. 2452: [Unity] /UNITY_PATH/Unity/Unity-5_5_3f1/Unity.app/Contents/UnityExtensions/Unity/Networking/UnityEngine.Networking.dll (Location of the symbol related to previous error)
9. 2453: [Unity] Assets/Plugins/LockStepNetworking/UnityEngine.Networking.dll (Location of the symbol related to previous error)

 

Yea, I've tried a clean build.

 

I also tried manually clearing out the cache, no dice there either. same error.

 

SVN

 

When I say I disabled it for standalone builds, I mean within the configuration of the DLL file (http://imgur.com/a/WCTNR) as far as I know there is no way to use #if defs for something like this, because its just sitting in the project.

 

Still havent come up with a solution, honestly it seems like the unity cloud server is ignoring the DLL configs.