Resolved Input.GetAxisRaw returning (0,0) on Scene Load

Problem:

I've seen a lot of forums about this similar problem and have tried many out to no avail. Here is my current situation and some of the tricks I've tried, I have a player that reads input through getaxis raw in an update function, when colliding with a 2D box collider it loads a new scene, sometimes it will allow for the player to continue walking when the button is held down in one direction. However, when I sprint (which basically adds +2 to the speed float) it will always return 0 or if I'm moving into a new scene I hadn't gone into it usually does as well. I know none of my other scripts are messing with the players input vector so it's the scene changing that resets it to 0.​

Attempted Solutions:

• Input.ResetInputAxes(): This was called in a coroutine and told to wait varying amounts of time to no avail. I called it out of a routine too and nothing changed.
• Additive Scene Loading: I saw this was a lot of people's solutions so I spent a while getting it to work. It would keep the scene loaded and then reload a new one... just as I had feared the input would reset to 0 still.

Conclusion:

There's one other possible solution I know of where each scene is turned into a prefab and deactivated/activated when need be... I really don't want to have to turn each scene into a prefab and build a script to load them it seems a bit too excessive considering everything else is ironed out except this one problem, especially since the pieces are somewhat already there, the input does sometimes work which makes me a little hesitant to completely give up on this just yet.

Any help would be appreciated!​

 

Update:

Since I had been getting impatient and wanted to get this working I decided to turn the scenes into prefabs and I still have the same issue! Now I at least know the problem isn't the scene changing but something else causing the change to reset. Is there anyway I could find out what is messing with my Input?​