Agent getting stuck on insignificant object

Hello, I am using some assets from the Stealth project to get a quick map for a game jam type of thing.

But after I added navmesh I am having some issues with a weird place the navmeshagent just looks as if it is trying to "hump" something on the ground.

After some testing I found that this right here (added a photo) is the corporate. Anyone know how to fix this?

The agent only has Character Controller at the moment but no rigidbody.

 

Never mind, I found the issue, for some reason standard assets FPS controller from unity decides that its best to place the Character Controller so that the pivot point is not a 0,0,0